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Ari Zeida
Ari Zeida
Departamento de Bioquímica y Centro de Investigaciones Biomédicas, Facultad de Medicina, Universidad
Verified email at fmed.edu.uy - Homepage
Title
Cited by
Cited by
Year
A coarse grained model for atomic-detailed DNA simulations with explicit electrostatics
PD Dans, A Zeida, MR Machado, S Pantano
Journal of chemical theory and computation 6 (5), 1711-1725, 2010
1602010
Molecular Basis of the Mechanism of Thiol Oxidation by Hydrogen Peroxide in Aqueous Solution: Challenging the SN2 Paradigm
A Zeida, R Babbush, MC Gonzalez Lebrero, M Trujillo, R Radi, DA Estrin
Chemical research in toxicology 25 (3), 741-746, 2012
832012
Acidity and nucleophilic reactivity of glutathione persulfide
D Benchoam, JA Semelak, E Cuevasanta, M Mastrogiovanni, ...
Journal of Biological Chemistry 295 (46), 15466-15481, 2020
802020
Catalysis of peroxide reduction by fast reacting protein thiols: focus review
A Zeida, M Trujillo, G Ferrer-Sueta, A Denicola, DA Estrin, R Radi
Chemical reviews 119 (19), 10829-10855, 2019
802019
The extraordinary catalytic ability of peroxiredoxins: a combined experimental and QM/MM study on the fast thiol oxidation step
A Zeida, AM Reyes, MCG Lebrero, R Radi, M Trujillo, DA Estrin
Chemical communications 50 (70), 10070-10073, 2014
592014
Breathing, bubbling, and bending: DNA flexibility from multimicrosecond simulations
A Zeida, MR Machado, PD Dans, S Pantano
Physical Review E 86 (2), 021903, 2012
482012
Insights into the mechanism of the reaction between hydrogen sulfide and peroxynitrite
E Cuevasanta, A Zeida, S Carballal, R Wedmann, UN Morzan, M Trujillo, ...
Free Radical Biology and Medicine 80, 93-100, 2015
462015
Mechanism of cysteine oxidation by peroxynitrite: An integrated experimental and theoretical study
A Zeida, MCG Lebrero, R Radi, M Trujillo, DA Estrin
Archives of biochemistry and biophysics 539 (1), 81-86, 2013
402013
Kinetics of formation and reactivity of the persulfide in the one-cysteine peroxiredoxin from Mycobacterium tuberculosis
E Cuevasanta, AM Reyes, A Zeida, M Mastrogiovanni, MI De Armas, ...
Journal of Biological Chemistry 294 (37), 13593-13605, 2019
392019
Mechanisms and consequences of protein cysteine oxidation: the role of the initial short-lived intermediates
L Turell, A Zeida, M Trujillo
Essays in Biochemistry 64 (1), 55-66, 2020
382020
The superoxide radical switch in the biology of nitric oxide and peroxynitrite
L Piacenza, A Zeida, M Trujillo, R Radi
Physiological Reviews 102 (4), 1881-1906, 2022
352022
Thiol redox biochemistry: insights from computer simulations
A Zeida, CM Guardia, P Lichtig, LL Perissinotti, LA Defelipe, A Turjanski, ...
Biophysical reviews 6, 27-46, 2014
342014
PrxQ B from Mycobacterium tuberculosis is a monomeric, thioredoxin-dependent and highly efficient fatty acid hydroperoxide reductase
AM Reyes, DS Vazquez, A Zeida, M Hugo, MD Piñeyro, MI De Armas, ...
Free Radical Biology and Medicine 101, 249-260, 2016
332016
Thiol-based chemical probes exhibit antiviral activity against SARS-CoV-2 via allosteric disulfide disruption in the spike glycoprotein
Y Shi, A Zeida, CE Edwards, ML Mallory, S Sastre, MR Machado, ...
Proceedings of the National Academy of Sciences 119 (6), e2120419119, 2022
322022
Nitrosodisulfide [S 2 NO]−(perthionitrite) is a true intermediate during the “cross-talk” of nitrosyl and sulfide
JP Marcolongo, UN Morzan, A Zeida, DA Scherlis, JA Olabe
Physical Chemistry Chemical Physics 18 (43), 30047-30052, 2016
322016
Chemical Reactivity and Spectroscopy Explored From QM/MM Molecular Dynamics Simulations Using the LIO Code
JP Marcolongo, A Zeida, JA Semelak, NO Foglia, UN Morzan, DA Estrin, ...
Frontiers in chemistry 6, 70, 2018
282018
Kinetics, subcellular localization, and contribution to parasite virulence of a Trypanosoma cruzi hybrid type A heme peroxidase (TcAPx-CcP)
M Hugo, A Martínez, M Trujillo, D Estrada, M Mastrogiovanni, E Linares, ...
Proceedings of the National Academy of Sciences 114 (8), E1326-E1335, 2017
262017
Molecular Basis of Hydroperoxide Specificity in Peroxiredoxins: The Case of AhpE from Mycobacterium tuberculosis
A Zeida, AM Reyes, P Lichtig, M Hugo, DS Vazquez, J Santos, ...
Biochemistry 54 (49), 7237-7247, 2015
252015
Akt is S-palmitoylated: a new layer of regulation for Akt
M Blaustein, E Piegari, C Martínez Calejman, A Vila, A Amante, ...
Frontiers in Cell and Developmental Biology 9, 626404, 2021
212021
From quantum to subcellular scales: multi-scale simulation approaches and the SIRAH force field
MR Machado, A Zeida, L Darré, S Pantano
Interface Focus 9 (3), 20180085, 2019
212019
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