Ignacio Arganda-Carreras

Cited by

	All	Since 2018
Citations	52510	42618
h-index	26	24
i10-index	41	36

10000

5000

2500

7500

201220132014201520162017201820192020202120222023140 581 1119 1617 2429 3697 5149 6777 8239 9825 9915 2696

Public access

View all

38 articles

3 articles

available

not available

Based on funding mandates

Co-authors

Johannes SchindelinVerified email at wisc.edu
Albert CardonaMRC LMB and University of CambridgeVerified email at mrc-lmb.cam.ac.uk
Stephan SaalfeldHHMI Janelia Research CampusVerified email at janelia.hhmi.org
Tobias PietzschCSBD/MPI-CBGVerified email at mpi-cbg.de
Curtis RuedenUniversity of Wisconsin-MadisonVerified email at wisc.edu
Mark Longair(Previously) Postdoctoral researcher, Institute of Neuroinformatics, Uni / ETH ZürichVerified email at longair.net
Stephan PreibischHHMI Janelia Research CampusVerified email at janelia.hhmi.org
Pavel TomancakResearch Group Leader at the Max Planck Institute of Molecular Cell Biology and Genetics in DresdenVerified email at mpi-cbg.de
Benjamin SchmidOptical Imaging Centre ErlangenVerified email at fau.de
Kevin EliceiriRRF Walter H. Helmerich Professor Medical Physics, Biomedical Engineering, UW-MadisonVerified email at wisc.edu
Jean-Yves TinevezResearch engineer, Institut Pasteur, Paris, FranceVerified email at pasteur.fr
Daniel James Whitemetrology engineer at infineonVerified email at infineon.com
H Sebastian SeungProfessor, Princeton Neuroscience Institute and Computer Science Dept.Verified email at princeton.edu
Fadi DornaikaIKERBASQUE Research Foundation - Ho Chi Minh City Open UniversityVerified email at ehu.eus
Carlos Ortiz de SolorzanoFull Professor - CIMA - Universidad de NavarraVerified email at unav.es
Philippe AndreyResearch Director (DR2), Institut National de la Recherche Agronomique (INRA)Verified email at inrae.fr
Arrate Muñoz BarrutiaProfessor, Univ. Carlos III de Madrid; Instituto de Investigación Sanitaria Gregorio MarañónVerified email at ing.uc3m.es
David LeglandINRAEVerified email at inrae.fr
Carlos Oscar S. Sorzano (ORCID:000...National Center of Biotechnology (CSIC)Verified email at cnb.csic.es
Gorka AzkuneAssociate Professor at University of the Basque Country (UPV/EHU)Verified email at ehu.eus

Ignacio Arganda-Carreras

Ikerbasque Associate Researcher at University of the Basque Country and DIPC

Verified email at ehu.eus - Homepage

Machine Learning Image Processing Computer Vision Bioimage Analysis Neuroscience


Title Sort by citations Sort by year Sort by title	Cited by Cited by	Year
Fiji: an open-source platform for biological-image analysis J Schindelin, I Arganda-Carreras, E Frise, V Kaynig, M Longair, T Pietzsch, ... Nature Methods 9 (7), 676–682, 2012	43960	2012
BoneJ: free and extensible bone image analysis in ImageJ M Doube, MM Kłosowski, I Arganda-Carreras, FP Cordelières, ... Bone 47 (6), 1076-1079, 2010	1933	2010
Trainable Weka Segmentation: a machine learning tool for microscopy pixel classification I Arganda-Carreras, V Kaynig, C Rueden, KW Eliceiri, J Schindelin, ... Bioinformatics 33 (15), 2424-2426, 2017	1489	2017
TrakEM2 software for neural circuit reconstruction A Cardona, S Saalfeld, J Schindelin, I Arganda-Carreras, S Preibisch, ... PloS one 7 (6), e38011, 2012	839	2012
MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ D Legland, I Arganda-Carreras, P Andrey Bioinformatics 32 (22), 3532-3534, 2016	814	2016
Serial two-photon tomography for automated ex vivo mouse brain imaging T Ragan, LR Kadiri, KU Venkataraju, K Bahlmann, J Sutin, J Taranda, ... Nature methods 9 (3), 255-258, 2012	589	2012
3D reconstruction of histological sections: Application to mammary gland tissue I Arganda‐Carreras, R Fernández‐González, A Muñoz‐Barrutia, ... Microscopy research and technique 73 (11), 1019-1029, 2010	569	2010
Consistent and elastic registration of histological sections using vector-spline regularization I Arganda-Carreras, COS Sorzano, R Marabini, JM Carazo, ... Computer Vision Approaches to Medical Image Analysis: Second International …, 2006	366	2006
Crowdsourcing the creation of image segmentation algorithms for connectomics I Arganda-Carreras, SC Turaga, DR Berger, D Cireşan, A Giusti, ... Frontiers in neuroanatomy 9, 142, 2015	324	2015
Mapping social behavior-induced brain activation at cellular resolution in the mouse Y Kim, KU Venkataraju, K Pradhan, C Mende, J Taranda, SC Turaga, ... Cell reports 10 (2), 292-305, 2015	257	2015
Vision-Based Fall Detection with Convolutional Neural Networks A Núñez-Marcos, G Azkune, I Arganda-Carreras Wireless Communications and Mobile Computing 2017, 1-16, 2017	213	2017
Deep learning on chest X-ray images to detect and evaluate pneumonia cases at the era of COVID-19 K Hammoudi, H Benhabiles, M Melkemi, F Dornaika, I Arganda-Carreras, ... Journal of medical systems 45 (7), 75, 2021	136	2021
Multicolor multiscale brain imaging with chromatic multiphoton serial microscopy L Abdeladim, KS Matho, S Clavreul, P Mahou, JM Sintes, X Solinas, ... Nature communications 10 (1), 1662, 2019	78	2019
ANHIR: automatic non-rigid histological image registration challenge J Borovec, J Kybic, I Arganda-Carreras, DV Sorokin, G Bueno, ... IEEE transactions on medical imaging 39 (10), 3042-3052, 2020	71	2020
Olfactory projectome in the zebrafish forebrain revealed by genetic single-neuron labelling N Miyasaka, I Arganda-Carreras, N Wakisaka, M Masuda, U Sümbül, ... Nature communications 5 (1), 3639, 2014	68	2014
Identifying neuronal lineages of Drosophila by sequence analysis of axon tracts A Cardona, S Saalfeld, I Arganda-Carreras, W Pereanu, J Schindelin, ... The Journal of Neuroscience 30 (22), 7538-7553, 2010	63	2010
An optimized approach to perform bone histomorphometry D Malhan, M Muelke, S Rosch, AB Schaefer, F Merboth, D Weisweiler, ... Frontiers in endocrinology 9, 666, 2018	53	2018
NucleusJ: an ImageJ plugin for quantifying 3D images of interphase nuclei A Poulet, I Arganda-Carreras, D Legland, AV Probst, P Andrey, C Tatout Bioinformatics 31 (7), 1144-1146, 2015	49	2015
MitoEM dataset: Large-scale 3D mitochondria instance segmentation from EM images D Wei, Z Lin, D Franco-Barranco, N Wendt, X Liu, W Yin, X Huang, ... International Conference on Medical Image Computing and Computer-Assisted …, 2020	48	2020
A generic classification-based method for segmentation of nuclei in 3D images of early embryos J Gul-Mohammed, I Arganda-Carreras, P Andrey, V Galy, T Boudier BMC bioinformatics 15 (1), 1-12, 2014	44	2014

The system can't perform the operation now. Try again later.

Articles 1–20

Citations per year

Duplicate citations

Merged citations

Add co-authorsCo-authors

Follow

Cited by

Co-authors